Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEGKNAVITLE-VSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAIGVKNGGVLQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILPPQQQEAAEVDEEESADAQPEGENEQ
1FEU Chain:A ((1-185))
MEYRLKAYYREGEKPSALRR---AGKLPGLMYNRHL-NRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVVPPEDVEKLAE----------------
General information:
TITO was launched using:
RESULT:
Template:
1FEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74705 for 1301 contacts (-57.4/contact) +
2D Compatibility (PS) -19603 + (NN) -3790 + (LL) 972
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -111226.0 ( -85.49 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1FEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FEU-query.scw
PDB file :
Tito_Scwrl_1FEU.pdb
: