Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALHYYCRHCGVKVGSLESSMVSTDSLGFQHLTNEERNDMISYKENGD------VHVLTICEDCQEAL--------DRNPHYHEYHTFIQ----------
5HJ0 Chain:A ((19-118))
QPSVFQCKKCFQIVGDSNAWVISHREYLSFTLSDAVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIYLDDIRDMYTFSMDKLQAYQLGN
General information:
TITO was launched using:
RESULT:
Template:
5HJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14965 for 456 contacts (-32.8/contact) +
2D Compatibility (PS) -7998 + (NN) -1654 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -26867.0 ( -58.92 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_5HJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5HJ0-query.scw
PDB file :
Tito_Scwrl_5HJ0.pdb
: