Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILYNNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG
1VHN Chain:A ((5-309))----------VKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILS--EKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKN--EVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKY-SEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE----------


General information:
TITO was launched using:
RESULT:

Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176035 for 2633 contacts (-66.9/contact) +
2D Compatibility (PS) -32870 + (NN) -11786 + (LL) 2288
1D Compatibility (HY) -19200 + (ID) 5600
Total energy: -243203.0 ( -92.37 by residue)
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_1VHN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VHN-query.scw
PDB file : Tito_Scwrl_1VHN.pdb: