Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
1T0A Chain:A ((2-159))
KIRIGHGFDVHKFGEPRPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALAKAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTEKLGFTGRKEGIAVEAVVLLSRQ
General information:
TITO was launched using:
RESULT:
Template:
1T0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106512 for 1331 contacts (-80.0/contact) +
2D Compatibility (PS) -17049 + (NN) -9605 + (LL) 0
1D Compatibility (HY) -16400 + (ID) 4900
Total energy: -154466.0 ( -116.05 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1T0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0A-query.scw
PDB file :
Tito_Scwrl_1T0A.pdb
: