Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKY------CSTCNSHTAHLETK
2B9D Chain:A ((1-52))
MKQPYAVVASCAYCEKLVRLTVLADHSAIRQLEEMLLRSLNIVCPLCTLQRQ-----
General information:
TITO was launched using:
RESULT:
Template:
2B9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1007 for 216 contacts (4.7/contact) +
2D Compatibility (PS) -4906 + (NN) -2348 + (LL) 440
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -7857.0 ( -36.38 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2B9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B9D-query.scw
PDB file :
Tito_Scwrl_2B9D.pdb
: