Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG
1DGZ Chain:A ((1-37))
MKVRASVKRICDKCKVIRRHGRVYVICENPKHKQRQG
General information:
TITO was launched using:
RESULT:
Template:
1DGZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5403 for 202 contacts (-26.7/contact) +
2D Compatibility (PS) -4170 + (NN) -3377 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -19650.0 ( -97.28 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1DGZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DGZ-query.scw
PDB file :
Tito_Scwrl_1DGZ.pdb
: