Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGCRPPKRRRV
4JV5 Chain:K ((1-116))--------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR-


General information:
TITO was launched using:
RESULT:

Template: 4JV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31498 for 865 contacts (-36.4/contact) +
2D Compatibility (PS) -13115 + (NN) -10278 + (LL) 1496
1D Compatibility (HY) -8800 + (ID) 3400
Total energy: -65595.0 ( -75.83 by residue)
QMean score : 0.668

(partial model without unconserved sides chains):
PDB file : Tito_4JV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JV5-query.scw
PDB file : Tito_Scwrl_4JV5.pdb: