Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIYLDPGHGGPDGGAVGG-KLLEKDVTLEVAFRVRDYLQEQG-ALVIMTRESDTDLAPEGTKGYSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKYAENEKVAKYIQ--------------------------------------DELRRN-LENTTRKAKRIHGIYLMQNVTKPGALIEVGFLSNPSEATLLGKPKYQDKVASSIYKGILRYFTEKGDPPE
3NE8 Chain:A ((3-230))--------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFL--------------RLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEA-SDAIAKSLAESENKVDLLDGLPKEDILLDLTRRETHAFSINFANNVVSNLSKSHINLINNPHRYA-DFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSIRQFAEYRQKI--


General information:
TITO was launched using:
RESULT:

Template: 3NE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54579 for 1489 contacts (-36.7/contact) +
2D Compatibility (PS) -19736 + (NN) -12434 + (LL) 3728
1D Compatibility (HY) -10400 + (ID) 3100
Total energy: -96521.0 ( -64.82 by residue)
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3NE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NE8-query.scw
PDB file : Tito_Scwrl_3NE8.pdb: