Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEPLNLHRLTTESRNSQTVEIHKANTLGILKMINNEDMKVAAAVQEVLPDIKTAVDCAYESFQNGGRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGIMAGGPEAFLQAAEGIEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARKVGAHTIALTCNENSAISKDADHSIEVVVGPEAITGSTRMKAATAHKMILNMISTAVMVKIGKVYENLMVDVNVSNKKLKERAISIIQSLTNASYDTARYTLEQADHHVKTAIVMLKTSTDQKQAQTLLDEANGFIDKAIEHYHP |
4S12 Chain:A ((4-298)) | ----MKLGALISESRNPDTMDLDTLSTLEMLTRINDEDRKVPEAIRLVIPNIAQAVDLAAKALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDDVSLGERDLRDLQLTATDMVVGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQEALVAISPVVGPEALTGSTRMKSGTAQKLVLNMLSTGAMVKLGKVYQNLMVDVKATNVKLVDRACRIVVEATGASRVEAENALSQTEFEVKPAILMILKGVSVEQARLNLQQHNGYLRAAL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153803 for 2556 contacts (-60.2/contact) +
2D Compatibility (PS) -32048 + (NN) -14863 + (LL) 288
1D Compatibility (HY) -26000 + (ID) 7550
Total energy: -233976.0 ( -91.54 by residue)
QMean score : 0.580
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