Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAGTQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
1SFE Chain:A ((12-176))
-----LAVRYALADCELGRCLVAESERGICAILLGDDDA-TLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN--------
General information:
TITO was launched using:
RESULT:
Template:
1SFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105094 for 1269 contacts (-82.8/contact) +
2D Compatibility (PS) -18108 + (NN) -8683 + (LL) 728
1D Compatibility (HY) -9200 + (ID) 2750
Total energy: -143107.0 ( -112.77 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1SFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFE-query.scw
PDB file :
Tito_Scwrl_1SFE.pdb
: