Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDEQMLTEWPSH---LPWLNQS-QNDFTFPSDTYLLLYFWSMSCPNCHQLTDKVL---QDIKDMNVKVIGVHVPYIEEEKSMEVVLTYALDRGLAIPIVLDQNYEIVTTCHVQGIPSFCLLSQYGQIITKTMGDVGWDKMLKKIAGL
2HYX Chain:A ((397-538))
---CGTAPDLKGITGWLNTPGNKPIDLKSL-RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVR--
General information:
TITO was launched using:
RESULT:
Template:
2HYX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117988 for 993 contacts (-118.8/contact) +
2D Compatibility (PS) -14222 + (NN) -5894 + (LL) 60
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -144544.0 ( -145.56 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2HYX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HYX-query.scw
PDB file :
Tito_Scwrl_2HYX.pdb
: