Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTDILAQTPYVLKQLRPTKAKKEKEKVRFQQEIKLLKNIHHPQIPGFIDEFIIDGQAYYVMQFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDIRTPNIIIN-DGRLCLIDFGLAKQLT----------------PEEMEEIKVR-KQDDFFDLGETLLFLLYSQY---------KGKKKKNGTWLEELTLTKEVTLLLKRLLGI-------EEEYQHTASIREDLNRAIQSVT----------------------------------------------------------- |
| 3H4J Chain:B ((27-356)) | -----------SKRHIG------PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEALRSDENNEVKEAYNLLHENQVIQEKLEHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117650 for 1727 contacts (-68.1/contact) +
2D Compatibility (PS) -25248 + (NN) -12539 + (LL) 1900
1D Compatibility (HY) -18400 + (ID) 2800
Total energy: -174737.0 ( -101.18 by residue)
QMean score : 0.484
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