Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAM-PIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
3JQW Chain:A ((3-115)) | ------------------------YPIGTEKEPNNSKETASGPIVPGI--P-VSGTIENTSDQDYFYFDVITPGEVKIDINKLGY-GGATWVVYDENNNAVSYATDDG------QNLSGKF-KADKPGRYYIHLYMFNG-SYMPYRINI----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56355 for 803 contacts (-70.2/contact) +
2D Compatibility (PS) -11734 + (NN) -2923 + (LL) 9932
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -63080.0 ( -78.56 by residue)
QMean score : 0.382
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