Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQRETSGHIAAIVTILIWGTTFISTKVLLADFSPMEILFYRFLMGFIALILVRPNMIPFRNWRQELLFAGAGLFGVTLYFLLENIALTYTYASNVGMIVSIIPMITAVLAHFLLEGEKLRLTFLIGFISALIGLLLITFNGNVVLRLNPLGDIMAAGAALVFGGYSIFMKKLSAYEYHIIELTQRVFLYGLLFMVPALFLFDFHFDLSRFSSASNILNMLFLGIGASALCFATWNYSVGVLGAVKSSAYIYMVPVITIAASVLILHENMTWIALLGGAL--TLLGLYISELKPKAKLLENGCKMDA
4HE8 Chain:J ((131-160))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYGDWLFVLLAVGFLLMAATVVAVALVEPG-------------


General information:
TITO was launched using:
RESULT:

Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 11 -4875 -443.18 -174.11
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain J : 0.37

3D Compatibility (PKB) : -443.18
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_4HE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HE8-query.scw
PDB file : Tito_Scwrl_4HE8.pdb: