Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MILETTAKASQQYKVMPIMISLLLAGFIGMFSETALNIALTDLM--KELNITAATVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFTVSLIFS----ILGTFIAALAPS-FSFLLAARIVQALGTGLLLPLMFNTILVIFPP--HKRGAAMGTIGLVIMFAPAIGPTFSGLVLEHLNWHWIFWISLPFLVLALVFGIAYMQNV---SETTKPK---IDVLSIILSTIGFGGIVFGFSNAGEGSGGWSSPTVIVSLIVGVVGLILFSIRQLTMKQPMMNLRAFKYPMFILGVIMVFICMMVILSSMLLLPMYLQGGLVLTAFASGLVLLP-GGILNGFMSPVTGRLFDKYGPKWLVIPGFVIVTVVLWFFSNVTTTSTAVLIIILHTCLMIGISMIMMPAQTNGL--NQLPREFYPDGTAIMNTLQQMAGAIGTAVAVSIMAAGQHD--YMSTVKNPADPAVIPQALTAGVQHAFVFAMIVAIIGLIGAFFMKRVKVDH----
4IKW Chain:A ((3-494))SIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYYGMRAILVYYMYYEVSKGGLGLDEHLALAIMSIYGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIVLGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISL-VGILGIIIPIIYFVVMYRSP------KTTAEERSRVIAYIPLFV--ASAMFWAIQEQGSTILANYADKRTQLDVAGIH------LSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPENETAYFGTIGGAALVLGLILLAIAPRIGRLMKG


General information:
TITO was launched using:
RESULT:

Template: 4IKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2228 -373402 -167.59 -804.74
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -167.59
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_4IKW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IKW-query.scw
PDB file : Tito_Scwrl_4IKW.pdb: