Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQLSKGQRIDLTKTNPGLTKAVIGLGWDTNKYSGGHDFDLDASAFLVDAHDNCVNDLDFVFYNNLEHPSGGVIHTGDNRTGEGDGDDEQIIVDFSKIPAHIEKIGITVTIHDAEARSQNFGQVSNAFVRVVDEETQNELLRFDLGEDFSIETAVVVCELYRHGGEWKFNAIGSGFSGGLAALCRNYGLQV
2KXV Chain:A ((19-189))------------------SMKNVLVGLGWDA-RSTDGQDFDLDASAFLLAANGKVRGDADFIFYNNLKSADGSVTHTGDNRTGEGDGDDESLKIKLDAVPGDVDKIIFVVTIHDAQARRQSFGQVSGAFIRLVNDDNQTEVARYDLTEDASTETAMLFGELYRHNGEWKFRAVGQGYAGGLASVCAQYGI--


General information:
TITO was launched using:
RESULT:

Template: 2KXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 864 -90794 -105.09 -530.96
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -105.09
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_2KXV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KXV-query.scw
PDB file : Tito_Scwrl_2KXV.pdb: