Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEELLERVFSFSDVDKLIDFISYELQKPVILESADFFLLAYNSYYINHFDSANQQTIFSKKCPVQIFERFLKDGIIEKLKTEPEPFRVNKIESIGLNQRVVVSAKHKGEVMGYIWIQELDQNLTDEELDFLYETSFHVGKIIYKTNKLKQEKEEKAEDLIKRAIYQQFTSEKELRREAERINTVLPSMFSVVILHAANGDG--EAVEDLKENIRSYLNLRDKVSHVLTIESNIVIVVASFSQKSSVSSAASEFINKLLTHFHFQKIPTPIYIGIGNEYNHLLKLGKSYTEALEVIKAAEITGNQENIPYEYAKLGIYRYLESIEQKNEFLEYENKDLALLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQITEMTSIDLSDFRTRCQLYLDLMLMKKK
3ONQ Chain:A ((20-259))------------------------------------------------------------------------------------------------------------------------------------------------------DDTTIERLAFECLLTNMTDD--RVVSLMNILGWQ--GDFNCFAIGGVPSASLASTSLAIRKAVRDLG---GEHVVIGTYGTFLLALACQMGAVT-----PEVTCTAVMPA----FS-EDEPLYLSPVRSGVAGASHALRETMFSLQAAPALS-TPSRPLRADELLPERALLGDD--YAREELYRNVYQVLRGEN--PDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGRM-


General information:
TITO was launched using:
RESULT:

Template: 3ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1175 -133094 -113.27 -559.22
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -113.27
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_3ONQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ONQ-query.scw
PDB file : Tito_Scwrl_3ONQ.pdb: