Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLSLFIIAVLMPVILLSACSDHAEEHASINTKKTVENITDVRKTAKTSIDWTKPSGGEYPDIKQKHVWIDVNVKEQKAYIKEGSNTIYTMMISSGLDQTKDDATPKGTFYVEPERGEWFFSE-G----------YQEGAEYWVSWKNHGEFLFHSVPMTKDQKVIKTEAEKLG-TKASHGCIRLTIPDAKWVYENIPEHTKVVIS
4JMN Chain:A ((123-250))-----------------------------------------------------------------DALIGVASISAHTFTVSRNGEVLRTMPASLGKPS---RPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSG-VYVHSAPWSV---------NSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEVV


General information:
TITO was launched using:
RESULT:

Template: 4JMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 620 -72867 -117.53 -628.16
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -117.53
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.376

(partial model without unconserved sides chains):
PDB file : Tito_4JMN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JMN-query.scw
PDB file : Tito_Scwrl_4JMN.pdb: