Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILGVTGFILICL-----LAISVLMDMLQGFSLTKAVYNNMSSFKMTTFAEWVV-----LLFFVLVLVREMYVIYKSKKKNP-
1HDM Chain:A ((13-93))-LQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFFFDFS--QNTRVPRLPEFADWAQEQGDAILFDKEFCEWMIQQIPKLDGKIPV


General information:
TITO was launched using:
RESULT:

Template: 1HDM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 176 -34469 -195.85 -492.41
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -195.85
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.319

(partial model without unconserved sides chains):
PDB file : Tito_1HDM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HDM-query.scw
PDB file : Tito_Scwrl_1HDM.pdb: