Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAARWHNQKDIRIEHIEEPKTEPGKVKIKVKWCGICGSDLHEYLGGPIFIPVDKPHPLTNETAPVTMGHEFSGEVVEVGEGVENYKVGDRVVVEPIFATHGHQG----AYNLDEQMGFLGLAGGGGGFSEYVSVDEELLFKLPDELSYEQGALVEPSAVALYAVRSSKLKAGDKAAVFGCGPIGLLVIEALKAAGATDIYAVELSPERQQKAEELGAIIV-DPSKTDDVVAEIAERT--G-GGVDVAFEVTGVPVVLRQAIQSTTIAGETVIVSIWEKG--AEIHPNDIVIKERTVKGIIGYRDIFPAVLSLMKEGYFSADKLVTKKIVLDDLIEEGFGALIKEKSQVKILVRPN
4EJ6 Chain:A ((24-362))MKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP------------STPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGD-VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLDEAP-DVISNPAAAG-EVKVLVIP-


General information:
TITO was launched using:
RESULT:

Template: 4EJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2043 -231329 -113.23 -703.13
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -113.23
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_4EJ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EJ6-query.scw
PDB file : Tito_Scwrl_4EJ6.pdb: