Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFWKNKNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHI---KKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKH--PLIK------RVIVASSDKAYGDQENLP--YDENMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAEKMEENNLAGEAFNFS--NEIQ-LTVLELVEKILKKMNSNLKPK-----------VLNQGSNEIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFFKK
1BXK Chain:A ((2-331))------RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGK----VGETYNIGGHNERKNLDVVETICELLEELAPN-KPHGVAHYRDLITF---------RYA-IDASKIARELGCVPQETFESGMRKTVQWY------


General information:
TITO was launched using:
RESULT:

Template: 1BXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1598 -156970 -98.23 -533.91
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -98.23
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_1BXK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BXK-query.scw
PDB file : Tito_Scwrl_1BXK.pdb: