Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTEEIMKWIRLSMRQSTEHS---ILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHRLENEIYHMPEEFQETLTEELDYLLYWHERILMRFVGKIKPHDDAVEEGIRYKQLLTKSFLKNQQNTDEELIDYNMLNIMASAVEYREQLEHLETLITSFQTYHPKDCEIETEE
3KMI Chain:A ((6-102))--------------------------------------------------------------------------------------------------------------------------------------------------NIHKIHEVQKKLQEEVSIVLIDIADIIVNPKKENGYSRDLYTLNSLIDSSISETYDNINNT-LLSD-----TRFFLEHMDI---IKSQRDILENLYSYVSQLNSTP--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 229 -20165 -88.05 -214.52
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -88.05
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3KMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KMI-query.scw
PDB file : Tito_Scwrl_3KMI.pdb: