Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIVALHVVLYQPEIPANTGNIARTCAATNTTLHLIRPLGFSTDDKMLKRAGLDYWEFVNVVYHDSLEELFEAYKKGKFFFITKFGQQPHTSFDYTDLDEDYFFVFGRETSGLPKDLIQNNMDRCLRLPMTEHVRSLNLSNTAAILVYEALRQQNYRDLK
4PZK Chain:B ((2-156))----GVHVVLYQPEIPANTGNIARTCAATGTELHLIRPLGFSTDDKMLKRAGLDYWQHVKITYYDSIEEFYEKNKDGEFFYLTKYGEKAHTAFDYSKREKDYYFVFGRETNGLPANVIEENFDHCLRIPMTDKVRSLNLSNTAAILIYEAFRQQNYPGL-


General information:
TITO was launched using:
RESULT:

Template: 4PZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 722 -116281 -161.05 -750.20
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.93

3D Compatibility (PKB) : -161.05
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_4PZK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PZK-query.scw
PDB file : Tito_Scwrl_4PZK.pdb: