Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNAEEKKGLQRAIEEITEIAKGFGLDFYPMRYEICPAEIIYTFGAYGMPTRFSHWSFGKQFHKMKLHYDLGLSKIYELVINSDPCYAFLLDSNSLIQNKLIVAHVLAHCDFFKNNCRFQNTKRDMVESMAATAERIKHYEQVHGIKEVESFLDAILSIQEHIDPSLVRPKLQWSVDDEEEEIEEAATPYDDLWSLDEKKPKKQVKKSKKPFPPRPEKDILLFIEEHSRELEPWQRDILTMMREEMLYFWPQLETKIMNEGWASYWHQRIIRELDLTSDEAIEFAKLNAGVVQPSKTGINPYYLGLKIFED---IEKRYNNP-TEEMKKMGVQPDSGREKMFEVREIESDISFIRNYLTKELVMREDLYLFQKQGRDYKIIDKQWKSVRDQLVSMRVNGGFPYLTVNDGDYMKNNELYIKHWYEGIELDLKYLEKVLPYLFQLWGRSVHIESVLEDKEVMFSYDGKGVHRRYL
4JPS Chain:B ((177-274))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQR-IMHNYDKLKSRISEI---IDSRRRLEEDL---KKQAAEYREIDKRMNSIKPDLIQLR-----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 100 -7249 -72.49 -77.12
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -72.49
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.294

(partial model without unconserved sides chains):
PDB file : Tito_4JPS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JPS-query.scw
PDB file : Tito_Scwrl_4JPS.pdb: