Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGNEPHGGVLINRCDPACHF--------EGCACQAELDQLALSDLELIAIGGYSPLTGFLGEKDYHSVVKEMRLANGLPWSLPITLPVGEKTA--RQLSAGDHVKLVK--DGVTYGMITVTDIYQPDKTQEALSVFKTNDPAHPGVKKLLA-RPDYYIGGPITVSSLPD-KSFEQFYATPAETRAAFQKLGWKTIVGFQTRNPVHRAHEYIQKTALET-VDGLLLHPLVGETKSDDIPSDIRMESYQALLNHYYPKDRVMLSVFPAAMRYAGPREAIFHALVRKNYGCTHFIVGRDHAGVG------SYYGTYDAQNIFQSFTEEELGIKPLFFEHSFYCRKCGNMGTSKTCPHSPRDHIHLSGTKVRELLRQGKKPPKEFSRPEVAAVLIKGLHQQPVAIKQNSGELQ
1M8P Chain:A ((2-391))--ANAPHGGVLKDLLARDAPRQAELAAEAESL-PAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVCEDNRLADGNVFSMPITLDASQEVIDEKKLQAASRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFGG-DPEHPAIVYLNNTVKEFYIGGKIEAVNKLNHYDYVALRYTPAELRVHFDKLGWSRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVGLTKPGDIDHFTRVRAYQALLPRY-PNGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKYK-DELGIEVVEFQMVTYLPDTDEYRPVDQVPAG-VKTLNISGTELRRRLRSGAHIPEWFSYPEVVKILRESNPP-------------


General information:
TITO was launched using:
RESULT:

Template: 1M8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2024 -190880 -94.31 -517.29
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -94.31
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_1M8P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M8P-query.scw
PDB file : Tito_Scwrl_1M8P.pdb: