Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMALFTAKVTARGGRAGHITSDDGVLDFDIVMPNAKKEGQTGTNPEQLFAAGYAACFGGALEHVAKEQNIEIDSEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPYSKATRGNVDVKLELK
2BJO Chain:A ((2-136))-ALFTAKVTARGGRAGHITSDDGVLDFDIVMPNAAAAGQTGTNPEQLFAAGYAACFGGALEHVAKEQNIEIDSEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPYSKATRGNVDVKLELK


General information:
TITO was launched using:
RESULT:

Template: 2BJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 499 -74659 -149.62 -553.03
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.98

3D Compatibility (PKB) : -149.62
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_2BJO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BJO-query.scw
PDB file : Tito_Scwrl_2BJO.pdb: