Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMKLPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVNTFNPEKKIKLATYASRCIENEILMYLRRNNKIRSE-V-----------------------------------------------------SFDEPLNIDWDGNELLLSDVLGTD-DDIITKDIEANVDKKLLKKALEQLNEREKQIMELRFGLVGEEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV
1L9Z Chain:H ((194-429))-----------------------------------------------------EGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPI------------DFIPDENLPSPVEAAAQSLLSEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESR--


General information:
TITO was launched using:
RESULT:

Template: 1L9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 415 -53498 -128.91 -311.03
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain H : 0.66

3D Compatibility (PKB) : -128.91
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.66
QMean score : ?

(partial model without unconserved sides chains):
PDB file : Tito_1L9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L9Z-query.scw
PDB file : Tito_Scwrl_1L9Z.pdb: