Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAHRILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKEHSPDLVTMDITMPEMDGITALKEIKQIDAQARIIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLN
3TMY Chain:B ((2-117))-GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNK---


General information:
TITO was launched using:
RESULT:

Template: 3TMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 593 -79589 -134.21 -686.11
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain B : 0.93

3D Compatibility (PKB) : -134.21
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.632

(partial model without unconserved sides chains):
PDB file : Tito_3TMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TMY-query.scw
PDB file : Tito_Scwrl_3TMY.pdb: