Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKRKANHVINGMNDAKSQGKGAGYIENDQLVLTEAERQNNKKRKTNQ
4NPD Chain:A ((11-29))---------------------NAFYEILHLPNLTEEQRNG--------


General information:
TITO was launched using:
RESULT:

Template: 4NPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 14 1465 104.64 77.11
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 104.64
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.084

(partial model without unconserved sides chains):
PDB file : Tito_4NPD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NPD-query.scw
PDB file : Tito_Scwrl_4NPD.pdb: