Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNPSKAEIKEILQRSKRIAVVGLSDRPDRTSHMVSKAMQDAGYEIIPVNPTIDEALGVKAVSSLKEIDGPIDIVNVFRRSEQLPGVAEEFLETDAPVFWAQQGLVNEEAYQMLKEKGRTVIMDLCIKVAHAVTK
2D59 Chain:A ((12-140))-----DEDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVANRCMMREHERL-


General information:
TITO was launched using:
RESULT:

Template: 2D59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 690 -92018 -133.36 -713.31
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -133.36
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.725

(partial model without unconserved sides chains):
PDB file : Tito_2D59.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D59-query.scw
PDB file : Tito_Scwrl_2D59.pdb: