Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MNFLLDLFTNWTFDKVLDYTLAAVIWSVFKSRSKQNKY---PGYFEKIRRYRNLHPLLRSLSMRVLLSITIHPYMFS
4MYY Chain:A ((2-85))SALEAKLLDEIKQSS-NQELESSIDQILESIINGGSMLNKFTKKEQILSEKQQIKQLSPLQRAALALKKLETKLNNTLHE


General information:
TITO was launched using:
RESULT:

Template: 4MYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 116 -5314 -45.81 -72.79
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -45.81
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_4MYY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MYY-query.scw
PDB file : Tito_Scwrl_4MYY.pdb: