Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------MGEIKKKFVQWLEKLLIRLKEPNVKEESLFEDLSPSNDVDTDGK------------YSKALSWGLENKKVKNIALTGPYGSGKSSI-LNTFQKQYSREY---------SFLNISLATFNTDTDDMENKLEKSI------LQQM----------IYRVHDRTIPFSRFKRIKHIRTKSIIINLIFFFAFIIVGIYLFKPDALKGIYAETLVSRSLGTEDQQQ--IRLTIL---------LALFFIVYPLLAYKRIYHFVR-ANLKLNKVTIANTTLEKNTGEENSSIFDKYLD-----EILYFF----EASKYNVVIFEDLDRFNNIGIF--------ERLR---------ELNELI--------NNSEQIDRRVVFIYAIKDDI-------------------------------------FGDADTEKL--------------------------------------TRDRTKFFDFIIPVI---PIINASNSGDILK-----KKIKHSP------YSDLINTHFLEDVTIYIDDMRVLKNIFNEFVIYQQKLSAIDLDPNKMLAMI---------IYKNIYPVDFSKLQYNKGL------------------VYEIFQKKQLIIEEQIKLINAKIQQL-ERKLANIEVESLKSIAELNFIYLSELEISNLNSNYDINIDGEVFRGNTSNKDRFFEKLKNAD----TIYCYLRNRNGPATIKEIATVFGRKPNYFEREDAIKAIEKNEI-------QKFKKEL-----LELEREKQEIRAQSLQVLITKMNSKDVFSDKLYEKKLLVYLLRHGYIDEMYNHYITYFYPESLSLSDIKFVFSIKNHE--------------------SLPYSFE--------------LDNIGKIMSKLVGAEFK-------------QIEVLN------------------------FHLLNYIMDHSEYRNYY------------DSIIERLANGSKESVTFIDG---FKERAINKAAFIQSISSKWDDFWSFIELRSNYTQQKKEEYLSDILTYADIADIIRMNKESVMSFTLSKYLNLLSLVSDEEKIKELLLKLQV-KFKSLDHLLNSETIYDFVVQRNL----YEINIKTLSV------ILNDAPNITYAAVKNSDQQAVINYVNDNIDIFVEKVLLTEEIEE--PEESFLELLNREDLDKRVKHA--MIMKKTFA--ISDIGE--------LIKELWP-----IVIRENKMV---------------ACWSNVITSYVEYNKKMPDFLIAFLNNPVNRKE-----LSKNNIEAFDDKF----------------DEAILEDISEEIINSRDITDE-TFEVLIASIQ-SWIYFPLGNVSEKRAK----LLIDNDLLSLTPENFKELKLNFDTLHIQLALRNPDEFIDKQG--DFSLDAND-------IKQLIDSNELS----QFNKEIFVQHLNSNCLTDGNN----DILKDTIYFINEH--NLKITNELLTFLLESPTTLDTRLSLLAGQIKHIDNESITEFLTKIGEPYSE-IAEKGRRIKISNNRTNKALVTALES-----KNYISSFKEDRERLRVNTKKK--------------------------------------------------------------------------------------------------------------------------
4F92 Chain:B ((2-1724))LAPRQVLDLEDLVFTQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSE---EQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDE--NLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLI--ILDEIHLLHDD--RGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMADM--VYVTQLAGRLMRAIFEIVLN----RGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLP--EEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELT-ITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSR------RWKQRKNVQNIN--LFVVDEVHLIGGENGPVLEVICSRMRYISS--QIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLHC-TEKDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVD


General information:
TITO was launched using:
RESULT:

Template: 4F92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 6220 119767 19.26 102.19
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : 19.26
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.222

(partial model without unconserved sides chains):
PDB file : Tito_4F92.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F92-query.scw
PDB file : Tito_Scwrl_4F92.pdb: