Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKRKGCFAAAGFMMIFVFVIASFLLVLLFFNRDLIKKLPIDTKTIVLERLTDYKPLVEEELESQGLSNYTSLILGMMYQESKGKGNDPMQSSESLGLKRNEITDPQLSVKQGIKQFTLMYKTGKEKGV-DLDTIIQSYNMGAGYIDFVAEHGGTHTEELAKQYSEQQVKKNPDLYTCG-GNAKNFRYPYCYGDYTYAEKVKEKTKTVEESLQVATLETMESKAHE
4HPE Chain:A ((27-178))------------------------------------------------------HQPMVEKYARENGISEYVNVLLAIIQVESGGTAEDVMQSSESLGLPPNSL-DTESSIKQGCKYFASLLSSSKNQGIDDLNVAIQSYNYGGGYVGYVAGKGKKHTFNLAESFAREKSGGKKVTYTNPIAVAKNGGWRWNYGNMFYVELVNQ-----------------------


General information:
TITO was launched using:
RESULT:

Template: 4HPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 686 -11493 -16.75 -78.18
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -16.75
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_4HPE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HPE-query.scw
PDB file : Tito_Scwrl_4HPE.pdb: