Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MKIDYVSDLHINHWIPWNVNQIKWEKRTREIVNR---------------LISNGN----------GEVLVIAGDFTEW-NQQTLWVLDEAAKQ--YEKVYFTYGNHDLYLLSKSQKRKYSDSLGRLNDLIQKAADMKNVTPLIKTTETY---KGKVFAGDVMWYLPKGIEGWDFFKGVSNDSNYIWLNGYNKVDGVRAMWKESMDWYETLENTQVDVFVSHVPPV----HNPYSPFEPNTCYMVDVPF--INAKHWVCGHDHLQAEFDKDGTSFHMNC--IGYPYDYDNYPSVNVIPGEEVDSYKTFELKTFEI
3RL5 Chain:A ((13-293))VTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTRSRTDGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWGWGFNLPRG---------------------QSLLDKWNLIPE-GTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTNPPIIFDLPNP---------------


General information:
TITO was launched using:
RESULT:

Template: 3RL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1210 10184 8.42 42.79
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 8.42
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_3RL5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RL5-query.scw
PDB file : Tito_Scwrl_3RL5.pdb: