Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTEIYVDGASAGNPGPSGIGIFIKHE--GKAESFSIPIGVHTNQEAEFLALIEGMKLCATRGYQ----SVSFRTDSDIVERATE-LEMVKNITFQPFVEEIIRLKAA-FPLFFIKWIPGKQNQKADLLAKEAIRLNEKN
4H8K Chain:A ((6-135))----IYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMNSELIVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPREKNARADELVNEAI------


General information:
TITO was launched using:
RESULT:

Template: 4H8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 542 -15980 -29.48 -130.98
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -29.48
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_4H8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H8K-query.scw
PDB file : Tito_Scwrl_4H8K.pdb: