Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFHDDKKNELQKKEEIITEAIDTLFQSSAFGNLINGFQNLINSSLKDVQTTIHVRERDTGLYIDITIPATFRDGEIVVDVKSRYLHVTLQEKQKHQNEATFTSMTRTVQLPYEVRQEDMETSWN-EQTMTLFFPKNKHE
4YDZ Chain:A ((30-126))--------------------------------SMLNNFNNIVPQQLNEVENT----AQKFCVKLDV---AAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQMTIDAPK----


General information:
TITO was launched using:
RESULT:

Template: 4YDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 361 -31786 -88.05 -331.10
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -88.05
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_4YDZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YDZ-query.scw
PDB file : Tito_Scwrl_4YDZ.pdb: