Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRGILIAVLGIAIVGTGYWGYKEHQEKDAVLLHAENNYQRAFHELTYQVDQLHDKIGTTLAMNSQKSLSPALIDVWRITSEAHNSVSQLPLTLMPFNKTEELLSKIGDFSYKTSVRDLDQKPLDKNEYTSLNKLYQQSEDIQNELRHVQHLVMSKNLRWMDVEMALASDEKQSDNTIINSFKTVEKNVGAFSTGTDLGPSFTSTKKEEKGFSHLKGKQISEQEAKQIAERFAP-DDNYSIKVVKSGKKTNRDVYSISMKDPDHKAVIYMDITKKGGHPVYLIQNREVKDQKISLNDGSNRALAFLKKNGFETDDLEIDESAQYDKIGVFSYVP-VENKVRMYPEAIRMKVALDDGEVVGFSARDFLTSHRKRTIPKPAITEAEAKSKLNKNVQVRETRLALITNELGQEVLCYEMLGTIENDTFRMYINAKDGSEEKVEKLKNAEPIYKDL
5BOI Chain:A ((7-232))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GREVSEDVAKQVARSFLNLKGNEQIHIVKSGKDADYEVYSLTITDPKTNQETYMDITQKGGYPLWVLEDRDIKKQNISLNDAMNKATKFLKDHRFE--SLVMAESAQYDNMGVFTFVEQTESGVRIYPDSVKMKMSLEDGSVIGFSAKDFLLKHRTRDIPKPKISKEQAKTKLNSNVKVMEERLAIITNDLNEEVLCYEFLGTIKNDTYRIFINADTGFEEKVEKLQN--------


General information:
TITO was launched using:
RESULT:

Template: 5BOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1056 27940 26.46 124.73
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 26.46
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.676

(partial model without unconserved sides chains):
PDB file : Tito_5BOI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BOI-query.scw
PDB file : Tito_Scwrl_5BOI.pdb: