Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKEKVIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPLAKQKGVVNASRLWEAQEKCPEAVVLRPRMQRYIDVSLQITAILEEYTDLVEPYSIDEQFMDITGSQKLFGTPMEIAKSIQGRIMREIGVYARVGIGPNKALAKIACDNFAKKNKNGIFTLTKENMKTEMWPLPVGSMFGVGSRMKHHLNRMGISTIGGLAAFPLDLLKKKWGINGHVLWMTANGIDYSPVSTSSLDGQKAIGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAG--VMGQTVSVSCRGADFDWPTGFNRQVKLAEPTNSTQDVYEAVRRLFLTFWDGKPVRRLGVNLSQLSSDDIWQLNLFQDYAKKMSLGYVMDGIKNRFGDTAIIRAASLTAAGQAFERAAKIGGHYK
4Q45 Chain:F ((2-342))---SRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSR-ERRGVISTANYPARKFGVRSAMPTGMALALCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDM---NKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQACDLVMLLKRFGKFGRILWERSQGIDERDVNSE--RLRKSVGVERTMAEDIHHWSE-CEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQ-----TTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDP----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1646 -148533 -90.24 -438.15
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain F : 0.70

3D Compatibility (PKB) : -90.24
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_4Q45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q45-query.scw
PDB file : Tito_Scwrl_4Q45.pdb: