Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMIKQCVICLSLLVFGTTAAHAEETPLVTARHMSKWEEIAVKEAKKRYPLAQVLFKQKVWDRKRKDEAVKQYHLTLREGSKEFGVFVTISFDPYSQKVNKIAILEEYQ
2LYX Chain:A ((4-87))------------------------TPLVTARHMSKWEEIAVKEAKKRYPLAQVLFKQKVWDRKRKDEAVKQYHLTLREGSKEFGVFVTISFDPYSQKVNKIAILEEYQ


General information:
TITO was launched using:
RESULT:

Template: 2LYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 328 -16524 -50.38 -196.71
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -50.38
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_2LYX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LYX-query.scw
PDB file : Tito_Scwrl_2LYX.pdb: