Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTFYDVQQLLKTFGHIVYFGDRELEIEFMLDELKELYMNHMIEKEQWARAAAVLRKELEQTKNGRDFYKG
2NN4 Chain:A ((1-62))LNTFYDVQQLLKTFGHIVYFGDRELEIEFMLDELKELYMNHMIEKEQWARAAAVLRKELEQT---------


General information:
TITO was launched using:
RESULT:

Template: 2NN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 177 -31393 -177.36 -506.34
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.96

3D Compatibility (PKB) : -177.36
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.760

(partial model without unconserved sides chains):
PDB file : Tito_2NN4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NN4-query.scw
PDB file : Tito_Scwrl_2NN4.pdb: