Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK
1JL3 Chain:A ((3-139))--NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK


General information:
TITO was launched using:
RESULT:

Template: 1JL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 693 -65994 -95.23 -481.71
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.99

3D Compatibility (PKB) : -95.23
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.730

(partial model without unconserved sides chains):
PDB file : Tito_1JL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JL3-query.scw
PDB file : Tito_Scwrl_1JL3.pdb: