Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLKQYVTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVEYAKEKQIDLVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIELSYLDGRNKLE-DYDILTLMKY
4M0K Chain:A ((30-199))-TLKQAIRTVPDFPEPGIQFKDITPVLGHPELLRLAIEALLEPFQEQEITKVVGIESRGFILGGMLAHHLDAGFVPVRKKGKLPYQTLAESYQLEYGTDTIEMHIDAIEPGDRVLIHDDVIATGGTAEATIRLVERAGGEVVGCAFLIELTGLQGRKRLPAHVPVHTVLQL


General information:
TITO was launched using:
RESULT:

Template: 4M0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 877 -131562 -150.01 -778.47
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -150.01
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_4M0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M0K-query.scw
PDB file : Tito_Scwrl_4M0K.pdb: