Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYAIIKTGGKQIKVEEGQTVYIEKLAAEAGETVTFEDVLFVGGDNVKVGNPTVEGATVTAKVEKQGRAKKITVFRYKPKKNVHKKQGHRQPYTKVTIEKINA
3J3W Chain:R ((1-102))MYAIIKTGGKQIKVEEGQTVYIEKLAAEAGETVTFEDVLFVGGDNVKVGNPTVEGATVTAKVEKQGRAKKITVFRYKPKKNVHKKQGHRQPYTKVTIEKINA


General information:
TITO was launched using:
RESULT:

Template: 3J3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain R - contact count / total energy / energy per contact / energy per residue : 387 -30695 -79.32 -300.93
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain R : 1.00

3D Compatibility (PKB) : -79.32
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 1.00
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_3J3W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J3W-query.scw
PDB file : Tito_Scwrl_3J3W.pdb: