Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLQPLLAKKIIAEVKKMYEREVIIVNTDGLIMAGTNDERVGQFHEGALICAKERRSVIITKEDETRLKGVKAGINLPVFFDHDVIAVFGLTGEPAEIQPFGELLRKMTELFIKESRHLEQSQWRERMLESFMIDWLQLKEWSPSFLEKAQLLGVDLSSRRQMILIQGYEWSP-HDIEQMARSWKSSY-PADLFIRWGNERILINHEVPQHEQRDRLLRKILHICSFANTASSQYTAAGAGRAVA-SSSLTDSYEQAEKALAVSLKR---KTPIFEEDLKLDMCLTEISPGTRNEFPQRVLGKAL----EHQELMNTIRTFFHHDLSLKQTAEDMHIHINTLRYRLAKAEQLTGLRFDRTEDVVTMYVALYFLDQDTK
3ONQ Chain:A ((20-262))---------------------------------------------------------------------------------------------------------------------------DDTTIERLAFECLLTNMTDD-RVVSLMNILGWQ--GDFNCFAIGGVPSASLASTSLAIRKAVRDLGGEHVVIGTYGTFLLALACQMGAVT---PEVTCTAVM----PAFSEDEPLYLSPVRSGVAGASHALRETMFSLQAAPALSTPSRPLRADELLPERALLGDD-YAREELYRNVYQ-VLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGRMRDR


General information:
TITO was launched using:
RESULT:

Template: 3ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1123 -32500 -28.94 -139.48
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -28.94
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_3ONQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ONQ-query.scw
PDB file : Tito_Scwrl_3ONQ.pdb: