Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKSA--VVSAGDFKRIKQMLANIK
3V9B Chain:A ((170-206))-------------------------------IFQNLTKKQRQSLRKMVIDIVLATDMSKHMNLLADLK


General information:
TITO was launched using:
RESULT:

Template: 3V9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 24 1891 78.77 54.01
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 78.77
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.777

(partial model without unconserved sides chains):
PDB file : Tito_3V9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V9B-query.scw
PDB file : Tito_Scwrl_3V9B.pdb: