Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHALITAGSKGLGRKVTETLLAKGYSVTVNYRQDEEAVSRLKEACPDCLDRLQFVKGDVTKKEDLLRIAEAALNRFGRIDFLINNAGPYIFERKKLADYTDDEWYGMLEGNLSAVFHLFKAVIPIMRKQQFGRIITYGFQGAAHAPGWLHRSAFGAAKVGLASLTKTIAIEEAEFGITANMVCPGDIVGDMKEASIEEARMRIGKEKTPIGRSGTGEDIARIIAFLCEENSDLVTGTVIEATGGLNVINKNQTT
4JRO Chain:C ((30-269))-KVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAG--ITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIIN--MASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTD-KLDEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLSVDGGM---------


General information:
TITO was launched using:
RESULT:

Template: 4JRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1352 -116306 -86.03 -484.61
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.76

3D Compatibility (PKB) : -86.03
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_4JRO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JRO-query.scw
PDB file : Tito_Scwrl_4JRO.pdb: