Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELYIITGASKGLGQAIALQA---LEKGHEVHALSRTKTDVSHKK--LTQHQIDL-INLEEA----EQQFETLLSSI-DSDRYSGIT---LINNAGMVTPIKRA--GEASLDELQRHYQLNLTAPVLLSQLFTKRFASYSG-KKTVVNITSGAAKNPYKGWSAYCSSKAGLDMFTRTFGFEQEDEELPVNMISFSPGVMDTEMQAVIRSSSKKDFHHIERFRKLNETGSLRSPDFIAGTLLSLLEKGTENGRIYDIKEFL
1NAS Chain:A ((8-248))--VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS----VRVLSYAPGPLDNDMQQLARETS-KDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDT------------


General information:
TITO was launched using:
RESULT:

Template: 1NAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1026 25060 24.42 111.87
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 24.42
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_1NAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NAS-query.scw
PDB file : Tito_Scwrl_1NAS.pdb: