Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDYRRDGQNDQHQTEPSHTEQQNTENQKLIGHSEQELLDAPVSYEAGRQETASALEMEKQETAVKKEKKRRAAWLSPILGGIIGGGLMLGIAPYLPSDQNQATETASANKQVQSDNFTTAPITNASNIADMVEDLEPTIVGISNIQTSQNNTFGTGGGSSSESESGTGSGVIFKKDSDKAYIITNNHVVEGANKLTVTLYNGETETAKLVGSDTITDLAVLEISG-KNVKKVASFGDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAINPGNSGGPLINASGQVIGINSLKVSESGVES-LGFAIPSNDVEPIVDQLLQNGKVDRPFLGVQMIDMSQVPETYQENTLGLFGDQLG-KGVYVKEVQANSPAEKAGIKSE-----------DVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLRKGKTKTLNATLTKQTESSSS
3QO6 Chain:B ((9-336))------------------------------------------------------------------------------------------------------------PKKLQTDELATV---------RLFQENTPSVVYITNLAVRQD-AFTL---DVLEVPQGSGSGFVWDK---QGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFG--LDHTLTTGVISGLRREISSAATGRPIQ-DVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKF-----APDQSVE--------QLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRIL-DQCKVGDEVTVEVLRGDHKEKISVTLEPKPDE---


General information:
TITO was launched using:
RESULT:

Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1689 18060 10.69 57.52
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : 10.69
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_3QO6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QO6-query.scw
PDB file : Tito_Scwrl_3QO6.pdb: