Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPFGQQLRELRRARKLTVNQLAVYSGISSATISKIENGKRGTPKPATIKKLAAVLKVPYENLMAAAGHI----QAFPEEIREASEGYQSVYEIYQTAVTRGAEHLPIFNSQKWEHLSKQDIENLSKYFDFLSSEAKKRASSS
1Y9Q Chain:A ((10-88))-SQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGE-SSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDL--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 253 -28104 -111.08 -374.71
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -111.08
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.745

(partial model without unconserved sides chains):
PDB file : Tito_1Y9Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y9Q-query.scw
PDB file : Tito_Scwrl_1Y9Q.pdb: