Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVYAVNMGIVFIWSWFAKMCGGRDDSLATGYRPNKLLIWIPLASLVLVSGLRYRVGTDFQTYTLLYELAGDYQNVWQIFGFGTAKTATDPGFTALLWLMNFITEDPQIMYFTVAVVTYSFIMKTLADYGRPFELSVFLFLGTFHYYASFNGIRQYMVAAVLFWAIRYIISGNWKRYFLIVLVSSLFHSSALIMIPVYFIVRRKAWSPAIFGLSALFLGMTFLYQKFISVFVVVLENSSYSHYEKWLMTNTNGMNVIKIAVLVLPLFLAFCYKERLRSLWPQIDIVVNLCLLGFLFGLLATKDVIFARFNIYFGLYQMILVPYFVRIFDEKSNALIYIAIVVCYFLYSYLLMPVDSSVLPYRTIFSR
2KBV Chain:A ((454-466))-----------------------------------------------------------------------------------------------------------------------------------------------------YGGLRGAIAFSLG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 6 -1179 -196.50 -90.69
target 2D structure prediction score : 0.00
Monomeric hydrophicity matching model chain A : 0.34

3D Compatibility (PKB) : -196.50
2D Compatibility (Sec. Struct. Predict.) : 0.00
1D Compatibility (Hydrophobicity) : 0.34
QMean score : 0.763

(partial model without unconserved sides chains):
PDB file : Tito_2KBV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KBV-query.scw
PDB file : Tito_Scwrl_2KBV.pdb: